# # -*- Perl -*- # pdb.pl aoe # adapted from pdf.pl, which is # Copyright (C) 2003-2005 Tadamasa Teranishi All rights reserved. # 2003-2005 Namazu Project All rights reserved. # This is free software with ABSOLUTELY NO WARRANTY. # # This program is free software; you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by # the Free Software Foundation; either versions 2, or (at your option) # any later version. # # This program is distributed in the hope that it will be useful # but WITHOUT ANY WARRANTY; without even the implied warranty of # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the # GNU General Public License for more details. # # You should have received a copy of the GNU General Public License # along with this program; if not, write to the Free Software # Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA # 02111-1307, USA # # This file must be encoded in EUC-JP encoding # package pdb; use strict; use File::Basename; require 'util.pl'; require 'gfilter.pl'; my $pdbconvpath = undef; my @pdbconvopts = undef; my $convname = undef; sub mediatype() { return ('application/pdb'); } sub status() { $pdbconvpath = util::checkcmd('txt2pdbdoc'); if (defined $pdbconvpath) { @pdbconvopts = ("-b","-d","-D"); return 'yes'; } return 'no'; } sub recursive() { return 0; } sub pre_codeconv() { return 0; } sub post_codeconv () { return 0; } sub add_magic ($) { my ($magic) = @_; $magic->addFileExts('\\.pdb$', 'application/pdb'); $magic->addMagicEntry("60\tstring\tTEXtREAd\tapplication/pdb"); return; } sub filter ($$$$$) { my ($orig_cfile, $cont, $weighted_str, $headings, $fields) = @_; my $cfile = defined $orig_cfile ? $$orig_cfile : ''; util::vprint("Processing pdb file ... (using '$pdbconvpath')\n"); my $tmpfile = util::tmpnam('NMZ.pdb'); util::writefile($tmpfile, $cont); { my @cmd = ($pdbconvpath, @pdbconvopts, $tmpfile); my $fh_out = IO::File->new_tmpfile(); my $status = util::syscmd( command => \@cmd, option => { "stdout" => $fh_out, "stderr" => "/dev/null", }, ); my $size = util::filesize($fh_out); if ($size == 0) { util::fclose($fh_out); unlink $tmpfile; return "Unable to convert file ($pdbconvpath error occurred)."; } if ($size > $conf::FILE_SIZE_MAX) { util::fclose($fh_out); unlink $tmpfile; return 'Too large pdb file.'; } $$cont = util::readfile($fh_out); util::fclose($fh_out); } unlink $tmpfile; # codeconv::toeuc($cont); codeconv::codeconv_document($cont); gfilter::line_adjust_filter($cont); gfilter::line_adjust_filter($weighted_str); gfilter::white_space_adjust_filter($cont); $fields->{'title'} = gfilter::filename_to_title($cfile, $weighted_str) unless $fields->{'title'}; gfilter::show_filter_debug_info($cont, $weighted_str, $fields, $headings); return undef; } 1;